The charge against Mark Kopp, superintendent of the Franklin County district, stems from a sexual abuse case involving a former middle school teacher.
Orlando police suspended the officer for not getting approval to arrest the girl, a first-grader who allegedly kicked someone at the Lucious and Emma Nixon Charter School.
Since the malware attack on Aug. 21, the district has had to re-image computers for all of its students.
A Security and Exchange Commission investigation found that leaders in the Montebello Unified district hid serious financial and management problems when trying to sell construction bonds.
The incident last month at Shortridge High School was captured on video, which appears to contradict the officer's version of the altercation.